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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
KR.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LQ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDK.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.4.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JF.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JD.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDASWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JG.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.1.5.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JF.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.1.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JD.1.1.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.7.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KW.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
MF.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LF.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KR.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.7.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.2.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KR.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.49SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
MF.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDK.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.4.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.26SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.37SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JQ.2.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.23.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DY.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KP.2.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LJ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LE.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
MD.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LE.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDQSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.502SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.285SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.582SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.580SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.306SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.280SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used