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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.177.82EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.462EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.218EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.74EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.50EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-21683South Korea
B.1.494EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.167EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.267EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.165EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.554EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.243.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
A.2.5.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.450EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.130EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.444EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AW.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.268EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.344EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.103EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.485EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.119EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.276EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.111EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.36.27EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.36.19EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.336EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.400.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.537EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.548EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.24.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.492EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.540EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.487EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.118EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.109EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.361EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.38EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
A.12EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.417EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AM.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.258.20EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.36.37EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.319EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.182EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.430EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.331EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.19EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-7551.2South Korea
AY.112.3 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.37EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
N.7EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used