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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.332EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
JB.2.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
BA.2.86.7EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.12EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
JW.1.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
XBB.2.3.18EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
XBC.1.6.5EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
FL.39EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
B.1.1.141EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.591EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.468EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.131 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.586EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.366EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.380EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.148EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.382EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.356EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.376EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.607EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.163EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.337EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.158EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.602EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.289EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
DV.7.1.6EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
XDHEWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
FL.15.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
EG.2.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
XBB.1.16.32EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
B.1.1.273EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.4.13 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.358EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
C.28EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.60EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.159EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.29EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.510EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.91EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.227EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.555EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.513EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.31EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
HN.4.1.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
XACEWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BA.1.1.11EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
XZEWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BF.1.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BA.4.6.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
XBJEWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used