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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.153NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.33NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.10NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.62NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.391NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.448NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
C.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
Q.1 (Alpha)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.46 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.99 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.322NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.160.23NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.416NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.239NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.375NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.432NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.241NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.298NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.433NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.39NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.561NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.605NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.36.29NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.596NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
W.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.565NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.361NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.101NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.478NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.177.86NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.543NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.139NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
C.31NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.221NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.362NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.265NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.585NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.351NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.36.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.36.8NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.243NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
R.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.216NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.471NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
C.16NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.420NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
L.3NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.36NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.518NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.551NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used