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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.438.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.22NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.21NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.22NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.10NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.38NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.38.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BT.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.55NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.2.76NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.1.30NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BE.11NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.9NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.31NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.4.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.24NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-17028.5South Korea
BA.5.6.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.1.10NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.41NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BS.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.1.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.36NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BM.1.1.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.12NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.5.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.18NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.5.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BN.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.513NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.338NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.284NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.9.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.498NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.184NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.187NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
D.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AE.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.110.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.342NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.500NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.511NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.428.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.506NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.482NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.335NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.36.36NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.499.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.38NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used