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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
CQ.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CH.1.1.24NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.43NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.19NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.38.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-19060.5South Korea
BF.7.19.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.1.43NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BA.5.2.12NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BF.7.23NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.214NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.284NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.351.3 (Beta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.318NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
R.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AY.29 (Delta)NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
ML.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.283NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BE.12NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.96NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
L.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AE.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
N.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.36NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.407NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.20NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.423NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.281NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AE.6NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.230NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.535NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
A.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
A.24NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-17727.2South Korea
B.1.564.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.345NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.53NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.450NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.334NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.589NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.335NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.169NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.43NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.42NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
AE.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.442NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.1.75NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.51NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.106NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
D.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
B.1.593NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used