Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BQ.1.25.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.13.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBC.1.4NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GC.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.40NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.1.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CH.1.1.11NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FJ.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BN.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DV.3.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.14NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.80NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GG.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.3.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CK.1.5NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.34NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GD.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.37.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.77NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FD.4.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.51NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.16.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.52NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
CH.1.1.27NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.65NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.75NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.21NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.18.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.24NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GL.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.1.24NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.78NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.1.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.1.45NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.13NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GK.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.24.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GK.1.8.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GE.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.5.1.7NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GA.4.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.3.2.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.13.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.20.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HK.8.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.19.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GE.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EG.6.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used