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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
EN.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.2.3.14NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.13NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
DV.8NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.11.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
GJ.1.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
HJ.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.5.101NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.31NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.5.28NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
GB.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FY.2.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.13NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.11NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.4.1.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FD.2.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FP.2NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FD.3NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FG.3NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.5.19NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BQ.1.1.56NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BQ.1.1.59NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.5.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
GA.2NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.5.6NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.5.67NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
FL.2.6NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.5.88NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.5.22NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
EN.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.2.3.14NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.13NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
DV.8NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.11.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GJ.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
HJ.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.101NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.31NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.28NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
GB.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FY.2.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.13NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.11NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FL.4.1.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FD.2.1NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FP.2NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FD.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
FG.3NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
XBB.1.5.19NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
BQ.1.1.56NWon-NCAATGCTGCAATCGTGCTAC20502873228751F-22388.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used