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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.182NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.218NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.12.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.22 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.128NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
B.1.36.33NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.405NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.296NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.412NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AC.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.421NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.364NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.82NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.61NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.47NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.38NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.251NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.2.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.6.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.11.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GM.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.129 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XAY.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.8.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.5.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.1.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.34NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.15.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.9.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FA.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
ER.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.1.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CQ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-21584South Korea
BA.5.2.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used