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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.445NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.124NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.384NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XAQNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.569NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.524NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
A.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.596.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.473NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.595.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.76.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.38.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.38.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BM.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.109NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.361NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.38NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.417NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AM.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.258.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.37NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.319NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.182NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.430NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.331NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1923.32South Korea
AY.112.3 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.37NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
N.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.515NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.287NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.431NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.170NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.506NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.6.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.438.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.188NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.39NWon-NGTTGCGACTACGTGATGAGG20552884928830R-1480.18South Korea
B.1.501NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.226NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.546NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.194NWon-NGTTGCGACTACGTGATGAGG20552884928830R-21584South Korea
B.1.429.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
P.1.9 (Gamma)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used