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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BE.13NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BW.1.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
FB.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.23NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.11NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.12NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.7.15NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.3.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
DN.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.1.10NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.1.28NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
CJ.1.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBF.6NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.1.15NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.1.31NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
GA.6NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.5.12NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.32NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.1.65NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.10NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.1.38NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
DT.3NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.5.5NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
DS.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.1.63NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
DU.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.1.53NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.7.4.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.15NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.1.6NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.2.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
CV.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBKNCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.14.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBK.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
EF.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
CM.3NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
DF.1.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.1.35NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
EH.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BQ.1.3.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
DF.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
CK.1.3NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.5.2.27NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.4NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.1.5.16NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
CM.10NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
XBB.2.11NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.5.2.25NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used