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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.390EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
N.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.319EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BG.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
JF.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
B.1.572EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.397EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Q.3 (Alpha)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.523EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.116 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.38 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.595.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.340EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.437EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.452EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.400EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
JN.1.25EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
JN.2.5EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
AY.16 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.46.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.37 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.336EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BA.5.1.9EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.1.317EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.397EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.621.1 (Mu)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BA.2.5EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BF.7.5EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-3870.9South Korea
BF.32EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-3870.9South Korea
BQ.1.1.67EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-3870.9South Korea
CK.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-3870.9South Korea
BE.1.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-3870.9South Korea
AY.16.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BA.2.9.7EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BA.2.72EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BA.2.7EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BA.2.20EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BA.2.73EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
XDZEWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
XEBEWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.263EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.180EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.464EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.234EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.231EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.243EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.517EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.291EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.258EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.349EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used