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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
A.5EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.422EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.6EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.56EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.4.7EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.198EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.366EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.441EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.416EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.63EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.263EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.135EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
FK.1.4.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
B.1.13EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
DR.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.160.15EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.219EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
N.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.208EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.125.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.78 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.159EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.43.5 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
XBC.1.6.4EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
FP.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
BA.2.2.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
BA.2.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.443EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
BA.2.25EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.1.237EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
XBNEWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
XBJ.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
B.1.356EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.462EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
A.29EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.147EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
P.1.6 (Gamma)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
P.1.5 (Gamma)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
P.1.4 (Gamma)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.420EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
XBB.2.12EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
BF.39.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-18253.7South Korea
EK.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
B.1.233EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
XBB.1.24EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-15016.3South Korea
B.1.1.320EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
C.33EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.635EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
C.21EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
C.14EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used