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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.435SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.445SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.124SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.384SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAQSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.569SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.524SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.596.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.473SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.595.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.76.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.38.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.38.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BM.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.50SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.494SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.167SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.267SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.165SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.554SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.243.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.2.5.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.450SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.130SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.444SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AW.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.268SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.344SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.103SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.485SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.119SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.276SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.111SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.336SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.400.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.537SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.548SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.24.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.492SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.540SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.487SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.118SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.357SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BP.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.46SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.3.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used