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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.535SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.24SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.564.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.345SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.53SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.450SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.334SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.589SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.335SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.169SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.43SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.42SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AE.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.442SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.75SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.51SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.106SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
D.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.593SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.438.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.48SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EK.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.66SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.1.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GS.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.1.21.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.5.1.37SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.39SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EE.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
ES.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.41SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.19.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.479SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.437SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.371SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.4.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.6.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HU.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.1.4.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KJ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JC.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.625SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HD.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GY.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used