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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
GE.1.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
V.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.149SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.413SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.9.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.107SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.10 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.47SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.36.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.41 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.71SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AS.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.142SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.166SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.4.11 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.34.2 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.50SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.60SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.52SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
W.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.250SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.63SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.27SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.130SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.44SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.469SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.7 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.41SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.90 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BF.30SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.1.1.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.2.87SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.2.33SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.46SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.58 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.26SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.31SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CP.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBGSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.98 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.32SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.1.1.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used