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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BQ.1.33SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.29SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.1.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CL.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BM.1.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBMSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18758.6South Korea
BF.34SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CB.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BR.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CL.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CH.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EF.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BR.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1.2.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CP.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.160.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BE.4.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.177.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBQSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.5.6.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CR.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BV.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GA.4.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GS.7.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XWSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.1.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
JN.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KG.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDJSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.3.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.1.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.5.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.36.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.86.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDFSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.575.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.620SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.2.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XDMSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.1.16SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18441.9South Korea
BA.2.30SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
LV.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used