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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBB.1.24.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.9.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FE.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FR.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GY.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBC.1.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.4.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18353.2South Korea
HH.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GY.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.5.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HH.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.85SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FU.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18758.6South Korea
FY.3.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.18.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.15SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3.12SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.23.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.21.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.1.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.5.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.28SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.42SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.4.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GR.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.21SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.568SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
P.1.13 (Gamma)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.372SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.634SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
C.37.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.630SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.360SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.578SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.544SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.448SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.425SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.354SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.503SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.22SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.3.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used