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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
GA.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.35SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GM.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.44SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FU.3.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-18758.6South Korea
FV.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GJ.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.22.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FE.1.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBL.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.56SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
EG.1.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.49SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBL.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FR.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.17SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.2.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCMSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HN.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.42.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HN.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DV.7.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.20.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.5.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.13.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JY.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCRSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.5.86SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GJ.1.2.8SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GE.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HN.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.16.29SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FL.1.5SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.11.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.1.2.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.3.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GL.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CM.8.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
JN.1.1.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.26SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.3.14SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBC.1.6.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GW.5.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
KC.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HK.3.10SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.5.5.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used