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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BR.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.79SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FD.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CM.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.25.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.13.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBC.1.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GC.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.40SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CH.1.1.11SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FJ.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BN.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DV.3.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.80SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GG.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.3.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CK.1.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.34SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GD.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.37.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.77SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FD.4.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.51SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.16.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.52SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CH.1.1.27SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.65SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.75SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.21SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.18.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-20338.9South Korea
BQ.1.24SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GL.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.24SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.78SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EG.1.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.45SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GK.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
FL.24.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GK.1.8.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GE.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
EG.5.1.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GA.4.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.3.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.13.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.20.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used