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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.438SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.35SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.178SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.208SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.197SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.491SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
EV.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
P.1.8 (Gamma)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.39.3 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-11836.9South Korea
BQ.1.8.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.190SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.552SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AF.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.89SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
M.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.1.333SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.429SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.463SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
U.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.373SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.80SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.433SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.36.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AN.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.28SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.221.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.242SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.160.9SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.449SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.152SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.146SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
D.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.81SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.258.24SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.160.11SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.160.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.71SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.445SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.21 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.123SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.143SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.29SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.48SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.46.6.1 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.112.1 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.360SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.177.49SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.347SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used