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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.341SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.161SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.69 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.46SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.139SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.508SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.94SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.463SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.357SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.318SWon-SCTACATGCACCAGCAACTGT20502311423133F-2729.83South Korea
B.1.557SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.119SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.160SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
D.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.447SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.110.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.180SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.155SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.92SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.145SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.120SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.77SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AE.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.504SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AE.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.201SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.221SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.410SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.411SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.310SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.185SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.258.9SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.329SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.229SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.342SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.90SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.169SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.53SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.4.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.528SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.175SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.6.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.483SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.181SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.113SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.594SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.328SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.13SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.145SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.547SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used