Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
HH.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
KT.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3.13SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3.9SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
GH.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
GJ.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
BF.7.4.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
EU.1.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3.19SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
GS.4.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
HH.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
HH.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
JY.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
GJ.1.2.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
GE.1.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
HG.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
GM.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
GJ.1.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
HH.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
HH.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3.20SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
GS.7.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
GE.1.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
FL.39.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
GS.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
GJ.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
KT.1.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
GE.1.2.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
GJ.1.2.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
HH.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
JA.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3.22SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
GS.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
HG.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3.17SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.6.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
XBB.2.3.16SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
GM.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
EU.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
GA.7.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
EU.1.1.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-17500.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used