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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.4.6NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.205NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.110NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.434NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.4.5NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.181NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.6.6NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.37NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.290NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.341NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.161NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AY.69 (Delta)NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.46NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.139NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.508NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.94NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.463NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.357NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.318NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.557NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.119NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.160NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
D.4NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.447NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.110.2NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.180NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.155NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.92NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.145NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.120NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.77NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AE.5NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.504NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
AE.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.201NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.221NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.410NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
B.1.1.411NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.22NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.5.2.21NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.5.2.22NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.10NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.38NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.38.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BF.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BT.1NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.5.2.55NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.2.76NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BA.5.1.30NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
BE.11NCorman-NCACATTGGCACCCGCAATC1957.892870628724F-23131.5Germany
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used