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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AY.4.2.4 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.161NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.58NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.75NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.411NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.217NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.35NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.17 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.41NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.527NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.500NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.147NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.487NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.68NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.121NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AA.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AS.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.115NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.127.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.88NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AP.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AK.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.98.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.13.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.34.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.124.1.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.203NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.8.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.7.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.254NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.36.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.122.2 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AQ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.209NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.236NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.33NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XQNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.59NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.395NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.120.2.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.532NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.408NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XHNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.423NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.550NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used