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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.179NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.125NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
G.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.438NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.35NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.178NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.208NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.197NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.491NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
P.1.8 (Gamma)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.39.3 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.8.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.112NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.123NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.143NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.48NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.46.6.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.112.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.360NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.347NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.195NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.321NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.379NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.78NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.231NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.49NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.67NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.190NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.120NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AM.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AA.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.249NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AA.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.505NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.406NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.115NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AA.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CA.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BM.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.46NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CU.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CA.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.40NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.160.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used