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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AY.53 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.128NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.451NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.313NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.402NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.609NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.344NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.556NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.245NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.403NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.636NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.126NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.47NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JD.1.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBC.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.31.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FD.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.44NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GN.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FW.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.1.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.144NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.288NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.249NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.378NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.97NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.439NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.408NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.256NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Q.7 (Alpha)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.460NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.262NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBUNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.351.5 (Beta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FZ.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.9.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBC.1.6.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JB.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.3.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used