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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XPNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DN.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.1.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EC.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.52NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.62NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.80 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.43.8 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.128 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.58NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.258.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.438NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.257NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.5.4 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.323NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.105 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.4.4 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.4.9 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.398NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.94 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.164NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.275NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.258.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.58NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.81NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.419NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.151NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.243NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
R.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.216NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.471NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.420NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
L.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.518NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.551NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.207NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.604NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used