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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
EG.5.2.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GP.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.311NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.104NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.258.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.225NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AV.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.309NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.105NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.258.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.307NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.171NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.57NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.67NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.279NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.67NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AD.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.201NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
W.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.8 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.7 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.41NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.90 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.1.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.33NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.46NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.58 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.31NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CP.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBGNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.98 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.32NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.1.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EF.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used