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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BF.7.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.47NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.58NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GH.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.2.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.96NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EZ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.8.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.32NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GD.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBZNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BR.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.79NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.14NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FD.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.25.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.13.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBC.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GC.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.40NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.2.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JC.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KE.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.8.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.56NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JD.1.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDTNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.2.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.617.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.109 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.4.2.2 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used