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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
FL.4.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.14.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.14.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.3.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DY.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.48NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.49NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.14.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.57NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.35NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FU.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.3.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.3.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.57NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.2.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.10.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.9.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.76NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.39NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.43NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.16.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.34.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JD.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.79NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HP.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FU.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EY.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.35NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EL.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.44NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FU.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used