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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
GK.8.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XENWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCVNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.31.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.50NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.78NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.43NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HR.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HS.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HH.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HU.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HV.1.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GP.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.3.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBVNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.6.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.54NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DR.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.27NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.5.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.59NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.15NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CA.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CP.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.3.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
ED.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CM.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CA.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.28NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DG.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.56NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.2.13NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HN.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KL.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.1.5.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.277NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.294NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used