Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
FT.3.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.4.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JZ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HS.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.73NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.1.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LB.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.3.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDYNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.18.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.4.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KS.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
MM.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.48.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.4.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
MC.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LB.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LP.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JN.1.50.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
MH.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LB.1.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LB.1.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.3.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LB.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.2.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
MA.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KP.3.1.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
LB.1.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.81NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBL.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.28.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.6.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.40NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.1.6.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XCWNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.2.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GK.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.36NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.108NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JS.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.104NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HH.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.4.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GW.5.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JE.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used