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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.353EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.407EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AA.4EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.160.13EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.47EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.182EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.218EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
A.11EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.22 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.128EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.36.33EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.405EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.296EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AC.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
C.27EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.421EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.364EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.82EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.61EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.47EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.38EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.251EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
A.2.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.512EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.265EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.401EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.362EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.453EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.637.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.36.10EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.599EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.128EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.451EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.8EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.313EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.402EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.609EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.344EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.556EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.245EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.403EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.636EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.126EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
XBC.1.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.466.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
C.36EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.222EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.470EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.31 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used