Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.36.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.36.8EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.213EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.12EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.341EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.89EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.36.23EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.30EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.315EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.204EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.50EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.170EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.232EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.84EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.76EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.301EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.36.7EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.269EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.234EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Z.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
V.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.36.22EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.282EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.131EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.274EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
A.25EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.235EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.65EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.45EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.165EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.258.12EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
XAY.2.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
XBC.1.2.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
XBC.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.87 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.111 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
XAY.2.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.129 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
XAY.2.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
N.5EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
P.1.15 (Gamma)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.348EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.575EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
C.26EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Q.4 (Alpha)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.442EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
P.1.1 (Gamma)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
A.2.5.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.600EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
P.1.12 (Gamma)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used