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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.125EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
G.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.438EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.35EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.178EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.208EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.197EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.491EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
P.1.8 (Gamma)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.39.3 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.12EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.123EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.143EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.29EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.46.6.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.112.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.360EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.49EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.347EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.195EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.321EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.379EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.78EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.16EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.231EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.49EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.67EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.190EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.120EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AM.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AA.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.249EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AA.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.406EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.115EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.29EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AA.8EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.190EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.552EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
C.5EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AF.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.89EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
M.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.333EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.429EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.463EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
U.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.373EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.80EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.433EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used