Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.267EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.165EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.554EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.243.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
A.2.5.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.450EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.130EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.444EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AW.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.268EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.344EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.103EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.485EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.119EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.276EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.111EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.36.27EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.36.19EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.336EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.400.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.537EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.548EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.24.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.492EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.540EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.487EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.118EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.501EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.226EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.546EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.194EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.429.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
P.1.9 (Gamma)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.25.1.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.203EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.157EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.176EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.3.4 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.393EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.432EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.388EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
P.6EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.48EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.112EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.274EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.515EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.258.23EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.370EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.118EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.137EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used