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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.438.4EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.49 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.43.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.332EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.12EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
XBC.1.6.5EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.141EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.591EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.468EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.131 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.586EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.366EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.380EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.148EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.382EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.356EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.376EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.607EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.163EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.337EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.158EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.602EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.289EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.367EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.385EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.244EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.351 (Beta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.258.17EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.479EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.437EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.371EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.4.4EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.625EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.507EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.178EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.273EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.211EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.474EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.160.14EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.297EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AH.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.280EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.597EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.45EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.72EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.43EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.85EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.66 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.72 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.133 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used