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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.258.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.215EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.36.20EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.82EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.462EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.218EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.74EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.550EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.261EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.38EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.160.25EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.238EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.631EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.627EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.519EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.514EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
GT.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
XBC.1.5EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.55EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.14EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.310EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.185EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.258.9EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.329EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.229EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.342EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.90EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.169EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.53EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.4.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.528EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.175EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.6.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.483EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.181EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.113EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.594EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.328EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.13EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.145EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.547EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.247EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.4.6EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.205EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.110EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.434EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.4.5EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.181EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.6.6EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.37EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used