Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.177.68EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.121EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AA.5EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AS.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.115EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.127.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.88EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.237EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.356EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.462EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
A.29EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.147EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
P.1.6 (Gamma)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
P.1.5 (Gamma)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
P.1.4 (Gamma)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.420EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.233EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.320EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
C.33EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.635EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
C.21EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
C.14EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.19 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
N.4EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AM.2EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.15 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.113EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.423EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.168EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.36.39EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.57EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AH.3EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.289EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.365EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.252EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.223EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.640.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.5EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.11 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.428EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.1.355EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.34.1.1 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.71 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.33.2 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.177.52EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.465EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.160.33EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
AY.4.2.5 (Delta)EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
S.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
B.1.221.1EWon-ETTCGGAAGAGACAGGTACGTT2147.622625926279F-22650South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used