Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
CM.5NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBC.1.3.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
JN.11.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XDLNCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
JN.17NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
AY.29.1 (Delta)NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
AY.29.2 (Delta)NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BC.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BA.2.10.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BA.2.3.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BA.2.3.13NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BA.2.3.9NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BA.2.10.2NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BA.2.56NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BA.2.29NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BA.2.10NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.443NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.595.4NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.495NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.294NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.1.453NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.44NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.350NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.304NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.315NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.516NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.354NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.162NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.1.426NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.1.402NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.424NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.1.61NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.264NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.581NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.330NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.1.205NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.1.177NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.301NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.308NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.1.210NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.1.325NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.590NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.116NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.496NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.438.4NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
AY.49 (Delta)NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.5.48NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.5.10NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
EK.2.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
XBB.1.5.2NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used