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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.110.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.1.342NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.511NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.428.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.506NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.482NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.1.335NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.36.36NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.499.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.38NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.1.116NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.134NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.1.393NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.1.381NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
C.32NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
AE.8NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.1.516NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.1.526NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.279NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BF.22NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BA.5.2.21NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BA.5.2.22NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BF.10NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BF.38NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BF.38.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BF.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BT.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BA.5.2.55NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BA.2.76NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BA.5.1.30NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BE.11NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BA.5.2.9NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BF.31NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BA.4.6NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BF.24NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BF.4NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BA.5.6.2NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BA.5.1.10NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BF.41NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BS.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BA.5.1.2NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BF.36NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BM.1.1.3NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BF.12NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BF.5.4NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BQ.1.18NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BF.5.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
BN.1.1NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.1.290NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
B.1.341NCorman-NGAGGAACGAGAAGAGGCTTG20552883328814R-22527.5Germany
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used