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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BA.2.47SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FK.1.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBC.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.26.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DS.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.1.11SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.27SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.3.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BE.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.9SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.11.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBF.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BZ.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.10.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.24SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.44SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BE.1.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.4.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.5.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.37SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.57SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CN.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.4.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.54SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.18SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.52SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BL.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.11.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.48SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JQ.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.10.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BL.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.23SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BL.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BE.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FS.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.54SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.29SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.29SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
N.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
P.1.15 (Gamma)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.348SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.575SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
C.26SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Q.4 (Alpha)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.442SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
P.1.1 (Gamma)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.2.5.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used