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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.576SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.325SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.22SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.521SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.378SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.206SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.28SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.13.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HV.1.9SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BM.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBESWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BE.1.4.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.3.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.3.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.36.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.599SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.128SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.451SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.313SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.402SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.609SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.344SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.556SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.245SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.403SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.636SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.126SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.47SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XDQ.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JD.1.1.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBC.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.31.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GK.1.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.27SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FD.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.44SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.26SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GN.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.93 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.31.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GW.5.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.38SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EG.2.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DN.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.3.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.4.1.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BW.1.1.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.2.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.312SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used