Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
DV.3.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.80SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GG.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.3.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CK.1.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.34SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GD.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.37.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.77SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FD.4.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.51SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.16.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.52SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CH.1.1.27SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.65SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.75SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.21SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.24SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GL.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.24SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.78SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EG.1.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.1.45SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.54SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DR.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.7.27SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CM.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.1.27SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.16SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.5.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.59SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.15SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.15SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CA.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CP.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.3.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
ED.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CA.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.28SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DG.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.2.56SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
KP.2.13SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XDP.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HN.8SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
KL.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GK.2.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.1.5.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HE.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used