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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
EG.4.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JZ.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HS.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.73SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.21SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FW.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GK.2.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EG.11SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JC.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GK.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.41.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.70SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JG.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.22.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.24SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XCFSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CH.1.1.32SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.109SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FR.1.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JN.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HK.33SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GK.5.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XCZSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.40SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.16.14SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EG.5.1.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.28SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.20.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.110SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.86.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GN.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HB.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
EG.10.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.89SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HR.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HP.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GW.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XCF.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.34SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HY.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JC.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.105SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.9.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GK.1.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FY.4.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.103SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
HC.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FE.1.1.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.94SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used