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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BQ.1.2.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.367SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
GK.1.9SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BN.1.3.13SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.45SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.244SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JD.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
CM.7.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FD.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
KG.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.13SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.351 (Beta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.36SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.30SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.19.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.100SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.16.19SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.43.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBB.1.5.18SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
KN.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.43.1 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.332SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JB.2.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.2.86.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
JW.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XBC.1.6.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
FL.39SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.141SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.591SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.468SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.131 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.586SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.366SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.380SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.148SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.382SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.356SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.376SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.607SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.163SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.337SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.158SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.602SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.289SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
DV.7.1.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
XDHSWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.507SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.273SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.211SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used