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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BA.5.1.10SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.41SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BS.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BA.5.1.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.36SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BM.1.1.3SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.12SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.5.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BQ.1.18SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BF.5.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BN.1.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
BN.1.3.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.290SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.341SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.161SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AY.69 (Delta)SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.46SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.139SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.508SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.94SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.463SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.357SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.557SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.119SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.160SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
D.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.447SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.110.2SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.180SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.155SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.92SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.145SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.120SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.77SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AE.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.504SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
AE.1SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.201SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.221SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.410SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.411SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.4SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.35SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
A.5SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.422SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.6SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.56SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.4.7SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.198SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
B.1.1.366SWon-SCTACATGCACCAGCAACTGT20502311423133F-22142.8South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used