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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.467SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.484SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.476SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.19SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
A.18SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.404SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
CV.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DJ.1.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.1.73SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
DW.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BR.5.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BA.2.75.3SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAKSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XAASWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.501SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.226SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.546SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.194SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.429.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
P.1.9 (Gamma)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.25.1.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.203SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.157SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.176SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.3.4 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.391SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.393SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.432SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.388SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
P.6SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.48SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.112SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.274SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.515SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.258.23SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.370SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.118SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.137SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.309SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.632SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.72SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.108SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.332SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.42.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.348SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.428.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AJ.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.459SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.160.29SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.415.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used