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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AY.133 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.5.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.43.7 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.33.1 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.493SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.351.2 (Beta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.640.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.352SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.251SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
HC.1SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XCJSWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FT.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FZ.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.595.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.495SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.294SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.453SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.44SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.350SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.304SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.315SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.516SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.354SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.162SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.426SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.402SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.424SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.61SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.264SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.581SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.330SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.205SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.177SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.301SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.308SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.210SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.325SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.590SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.116SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.496SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.438.4SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
AY.49 (Delta)SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GW.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
XBB.1.40SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
FY.7SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BQ.1.2.2SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.1.367SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
GK.1.9SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
BN.1.3.13SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
B.1.385SWon-SCACCTGTGCCTGTTAAACCA20502321323194R-21965.9South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used